Shiny_phyloseq is a web application allowing to analyse fastq amplicon sequences of the 16S rRNA gene using the DADA2 analytical pipeline developed by Dr. Benjamin CALLAHAN. The application will provide a phyloseq object along with the ability to export all associated parameters used for it's creation. The phyloseq object can be further analyzed in our in house developed PhyloIgSeq application. The application is not fully developed and still includes certain bugs that will be fixed in the near future.
Of note, this app is only available locally.
Shiny_phyloseq (full screen version, alternative)
Application authors: Julia ADELLE & Martin LARSEN
Application presentation by Julia ADELLE:
In preparation......
Web server administrator: Paul CASSAN